Solyc08g006530.4.1 (ATCOL4, COL4, Solyc08g006530)

Aliases : ATCOL4, COL4, Solyc08g006530

Description : transcription factor (BBX-CO)

Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g006530.4.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g17369	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021680.21	No alias	No description available	0.01	OrthoFinder output from all 47 species
Cre12.g534100	COL2, ATCOL2	No description available	0.05	OrthoFinder output from all 47 species
Lfl_g05304	ATCOL4, COL4	floral promoter *(CONSTANS) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043531	ADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	285	327
IPR000315	Znf_B-box	53	98

External Links

No external refs found!