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  5. Solyc08g006280.2.1

Solyc08g006280.2.1 (MEE45, Solyc08g006280)


Aliases : MEE45, Solyc08g006280

Description : transcription factor (REM)


Gene families : OG0009289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g006280.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G24700 No alias Transcriptional factor B3 family protein 0.03 OrthoFinder output from all 47 species
AT4G31690 No alias Transcriptional factor B3 family protein 0.04 OrthoFinder output from all 47 species
Solyc08g006483.1.1 Solyc08g006483 B3 domain-containing protein REM9 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 137 224
IPR003340 B3_DNA-bd 458 540
No external refs found!