Solyc08g006190.3.1 (Solyc08g006190)

Aliases : Solyc08g006190

Description : transcription factor (REM)

Gene families : OG0009289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009289_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g006190.3.1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os02g10420.1	LOC_Os02g10420	B3 domain-containing protein LOC_Os02g10420 OS=Oryza...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003340	B3_DNA-bd	156	243
IPR003340	B3_DNA-bd	303	390
IPR003340	B3_DNA-bd	434	514
IPR003340	B3_DNA-bd	15	93

External Links

No external refs found!