1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g005630.3.1

Solyc08g005630.3.1 (Solyc08g005630)


Aliases : Solyc08g005630

Description : Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana (sp|o65709|fao4a_arath : 756.0)


Gene families : OG0000816 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000816_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005630.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g103191 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g14724 No alias fatty alcohol oxidase *(FAO) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009641 No alias not classified & original description: CDS=175-2550 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029779 No alias not classified & original description: CDS=133-825 0.03 OrthoFinder output from all 47 species
Cba_g24307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027855001 FAO3, ATFAO3 Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus 0.03 OrthoFinder output from all 47 species
Gb_20886 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.04 OrthoFinder output from all 47 species
Gb_39870 FAO3, ATFAO3 Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g40840.1 LOC_Os02g40840 Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus... 0.03 OrthoFinder output from all 47 species
MA_10427421g0010 No alias Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus... 0.02 OrthoFinder output from all 47 species
MA_232327g0010 No alias Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g08886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001808 No alias not classified & original description: CDS=1-2460 0.03 OrthoFinder output from all 47 species
Tin_g08800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 257 524
IPR007867 GMC_OxRtase_C 630 758
No external refs found!