1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g005620.3.1

Solyc08g005620.3.1 (Solyc08g005620)


Aliases : Solyc08g005620

Description : GASA precursor polypeptide


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005620.3.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00261380 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00230770 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.06 OrthoFinder output from all 47 species
AMTR_s00052p00079580 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
AMTR_s00053p00132370 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.06 OrthoFinder output from all 47 species
AMTR_s00060p00095260 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AT1G74670 No alias Gibberellin-regulated family protein 0.05 OrthoFinder output from all 47 species
AT2G18420 No alias Gibberellin-regulated family protein 0.05 OrthoFinder output from all 47 species
AT2G39540 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
AT3G02885 GASA5 GAST1 protein homolog 5 0.04 OrthoFinder output from all 47 species
AT4G09600 GASA3 GAST1 protein homolog 3 0.03 OrthoFinder output from all 47 species
AT4G09610 GASA2 GAST1 protein homolog 2 0.04 OrthoFinder output from all 47 species
AT5G15230 GASA4 GAST1 protein homolog 4 0.06 OrthoFinder output from all 47 species
Adi_g047206 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00312 No alias GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g36519 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39883 GASA2 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34519 GASA1 GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Als_g01280 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38420 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12349.t1 Aspi01Gene12349 GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21801.t1 Aspi01Gene21801 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33463.t1 Aspi01Gene33463 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53349.t1 Aspi01Gene53349 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53352.t1 Aspi01Gene53352 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69064.t1 Aspi01Gene69064 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70040.t1 GASA5, Aspi01Gene70040 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024387 No alias GASA precursor polypeptide & original description: CDS=233-526 0.03 OrthoFinder output from all 47 species
Azfi_s0066.g036114 No alias GASA precursor polypeptide & original description: CDS=221-619 0.07 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05518 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07912 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G080000.1 Ceric.04G080000 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G011100.1 GASA3, Ceric.07G011100 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.13G031500.1 Ceric.13G031500 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G026700.1 Ceric.37G026700 GASA precursor polypeptide & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g12277 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21845 No alias GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g27039 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29758 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41660 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14897 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22315 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27816 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28012 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003388001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01007817001 No alias Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
GSVIVT01009902001 No alias Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
GSVIVT01034476001 No alias Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
GSVIVT01034477001 No alias Phytohormones.signalling peptides.CRP... 0.06 OrthoFinder output from all 47 species
Gb_04075 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Gb_11307 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Gb_12909 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Gb_33214 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Gb_34465 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
LOC_Os03g55290.1 LOC_Os03g55290 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
LOC_Os04g39110.1 LOC_Os04g39110 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
LOC_Os05g31280.1 LOC_Os05g31280 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
LOC_Os05g35690.1 LOC_Os05g35690 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
LOC_Os06g15620.1 LOC_Os06g15620 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
LOC_Os09g24840.1 LOC_Os09g24840 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species
Len_g04492 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Len_g46952 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14189 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_132217g0010 No alias GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
MA_153079g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_190475g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.07 OrthoFinder output from all 47 species
MA_25298g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_40654g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_444615g0010 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_717315g0010 GASA2 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_7575249g0010 No alias GASA precursor polypeptide 0.07 OrthoFinder output from all 47 species
MA_9071020g0010 GASA2 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_9084305g0010 GASA2 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Msp_g08513 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08529 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08530 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12939 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02603 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17763 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25284 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25552 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13923 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g20309 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g24863 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61575 GASA3 GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002523 GASA5 GASA precursor polypeptide & original description: CDS=1-306 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012542 GASA5 GASA precursor polypeptide & original description: CDS=438-746 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015335 No alias GASA precursor polypeptide & original description: CDS=1460-1924 0.04 OrthoFinder output from all 47 species
Sam_g09640 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Smo115445 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Smo440818 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Solyc02g083870.3.1 Solyc02g083870 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc02g089350.3.1 Solyc02g089350 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc03g116060.4.1 Solyc03g116060 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc06g007920.3.1 Solyc06g007920 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Solyc06g069790.4.1 Solyc06g069790 GASA precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc12g042500.2.1 Solyc12g042500 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc12g042520.3.1 Solyc12g042520 GASA precursor polypeptide 0.07 OrthoFinder output from all 47 species
Tin_g12034 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13744 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38213 No alias GASA precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e004992_P001 Zm00001e004992 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e042254_P001 Zm00001e042254 GASA precursor polypeptide 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 31 89
No external refs found!