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  5. Solyc08g005490.3.1

Solyc08g005490.3.1 (Solyc08g005490)


Aliases : Solyc08g005490

Description : Probable methyltransferase PMT20 OS=Arabidopsis thaliana (sp|q9c6s7|pmtk_arath : 989.0)


Gene families : OG0002831 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002831_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005490.3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT4G19120 ERD3 S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045992 No alias not classified & original description: CDS=410-1948 0.03 OrthoFinder output from all 47 species
Ceric.02G040600.1 ERD3, Ceric.02G040600 not classified & original description: pacid=50585333... 0.03 OrthoFinder output from all 47 species
Dcu_g14590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07017 ERD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo174651 ERD3 Probable methyltransferase PMT21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 81 588
No external refs found!