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  5. Solyc08g005220.4.1

Solyc08g005220.4.1 (Solyc08g005220)


Aliases : Solyc08g005220

Description : Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana (sp|o82291|pap3_arath : 251.0)


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g005220.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00216930 evm_27.TU.AmTr_v1... Light-induced protein, chloroplastic OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
AT4G04020 FIB fibrillin 0.03 OrthoFinder output from all 47 species
AT4G22240 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.03 OrthoFinder output from all 47 species
Adi_g113977 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Aev_g39447 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Als_g48636 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.18 No alias Plastoglobulin-1, chloroplastic OS=Pisum sativum 0.01 OrthoFinder output from all 47 species
LOC_Os10g42500.1 LOC_Os10g42500 Probable plastid-lipid-associated protein 3,... 0.03 OrthoFinder output from all 47 species
Ore_g27450 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ore_g27451 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Ore_g45290 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Solyc02g081170.4.1 FIB, Solyc02g081170 Light-induced protein, chloroplastic OS=Solanum... 0.03 OrthoFinder output from all 47 species
Zm00001e007939_P001 Zm00001e007939 Probable plastid-lipid-associated protein 2,... 0.03 OrthoFinder output from all 47 species
Zm00001e040997_P002 Zm00001e040997 Probable plastid-lipid-associated protein 2,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 197 408
No external refs found!