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  5. Solyc07g066540.1.1

Solyc07g066540.1.1 (Solyc07g066540)


Aliases : Solyc07g066540

Description : no hits & (original description: none)


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g066540.1.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00158580 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00147p00098270 evm_27.TU.AmTr_v1... No description available 0.11 OrthoFinder output from all 47 species
AT3G12870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.14 OrthoFinder output from all 47 species
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.13 OrthoFinder output from all 47 species
Gb_12879 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_41752 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g56700.1 LOC_Os03g56700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426247g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_457405g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003362 No alias not classified & original description: CDS=1-648 0.03 OrthoFinder output from all 47 species
Sam_g17313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005688_P001 Zm00001e005688 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!