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Aliases : UPL1, Solyc07g065630
Description : E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana (sp|q8gy23|upl1_arath : 2480.0)
Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc07g065630.4.1 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00211330 | UPL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.1 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00204480 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G55860 | UPL1 | ubiquitin-protein ligase 1 | 0.12 | OrthoFinder output from all 47 species | |
| AT1G70320 | UPL2 | ubiquitin-protein ligase 2 | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g016298 | UPL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g026954 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g037076 | UPL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g052147 | UPL2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077941 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g04900 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Aev_g16628 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ala_g06583 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ala_g06863 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g16302 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Als_g40877 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27017 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g26360 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene08879.t1 | UPL1, Aspi01Gene08879 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene10348.t1 | UPL1, Aspi01Gene10348 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0029.g024164 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=1-11178 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042300 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046399 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g36312 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G067500.1 | UPL2, Ceric.10G067500 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.18 | OrthoFinder output from all 47 species | |
| Ceric.29G011900.1 | UPL1, Ceric.29G011900 | E3 ubiquitin ligase *(UPL1) & original description:... | 0.2 | OrthoFinder output from all 47 species | |
| Cre01.g012450 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g02070 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g12771 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Dde_g04957 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21858 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10043 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g21297 | UPL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009206001 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01009208001 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana | 0.17 | OrthoFinder output from all 47 species | |
| GSVIVT01014697001 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01014698001 | UPL1 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17424 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.09 | OrthoFinder output from all 47 species | |
| Gb_21632 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.12 | OrthoFinder output from all 47 species | |
| Gb_26784 | UPL2 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26785 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g24080.1 | UPL2, LOC_Os12g24080 | monomeric E3 ubiquitin ligase (HECT) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g22981 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Len_g23822 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Lfl_g05050 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g40796 | UPL2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_20049g0010 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.11 | OrthoFinder output from all 47 species | |
| MA_20049g0020 | UPL1 | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... | 0.12 | OrthoFinder output from all 47 species | |
| MA_7295g0010 | No alias | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| MA_7295g0020 | UPL2 | E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana... | 0.11 | OrthoFinder output from all 47 species | |
| Mp4g21620.1 | UPL1 | monomeric E3 ubiquitin ligase (HECT) | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g19139 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48585 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g13587 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g15570 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g20483 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02429 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06511 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003603 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=387-11411 | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0141.g022779 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: CDS=249-11528 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40563 | No alias | E3 ubiquitin ligase *(UPL1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g40576 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo154179 | UPL2 | Protein degradation.peptide tagging.Ubiquitin... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g17792 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g23911 | UPL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29717 | UPL1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g33388 | UPL2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g40173 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g45124 | UPL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g52454 | UPL1 | E3 ubiquitin ligase *(UPL1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g21189 | UPL1 | E3 ubiquiTin ligase *(UPL1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009321_P001 | UPL1, Zm00001e009321 | monomeric E3 ubiquitin ligase (HECT) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e017836_P002 | UPL1, Zm00001e017836 | monomeric E3 ubiquitin ligase (HECT) | 0.16 | OrthoFinder output from all 47 species | |
| Zm00001e039654_P001 | UPL1, Zm00001e039654 | monomeric E3 ubiquitin ligase (HECT) | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| No external refs found! |