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  5. Solyc07g065440.4.1

Solyc07g065440.4.1 (ATSPO11-1, Solyc07g065440)


Aliases : ATSPO11-1, Solyc07g065440

Description : Meiotic recombination protein SPO11-1 OS=Arabidopsis thaliana (sp|q9m4a2|spo11_arath : 162.0)


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g065440.4.1
Cluster HCCA: Cluster_472

Target Alias Description ECC score Gene Family Method Actions
AT3G13170 ATSPO11-1 Spo11/DNA topoisomerase VI, subunit A protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g17610.1 BIN5, RHL2,... DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 74 135
No external refs found!