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  5. Solyc07g064700.4.1

Solyc07g064700.4.1 (Solyc07g064700)


Aliases : Solyc07g064700

Description : no hits & (original description: none)


Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g064700.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00185170 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G55040 No alias DNA-binding bromodomain-containing protein 0.07 OrthoFinder output from all 47 species
Ala_g08601 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Als_g08054 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Aob_g18890 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g08781 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49439.t1 Aspi01Gene49439 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ceric.15G032800.1 Ceric.15G032800 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ceric.20G005700.1 Ceric.20G005700 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ceric.29G070400.1 Ceric.29G070400 SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.150 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g24243 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ehy_g09954 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Ehy_g30103 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
GSVIVT01029855001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g03870.1 LOC_Os03g03870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g37760.1 LOC_Os09g37760 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g19175 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Len_g27991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05033 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
MA_10428440g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g15890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g41800 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.05 OrthoFinder output from all 47 species
Pir_g15318 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g60712 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g11339 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g41680 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015144 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Sam_g05122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40232 No alias SMARCI component *(BRD) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Spa_g36090 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g10292 No alias SMARCI component *(BRD) of SWI/SNF chromaTin remodeling... 0.02 OrthoFinder output from all 47 species
Zm00001e000248_P001 Zm00001e000248 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 10 91
No external refs found!