1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g064620.2.1

Solyc07g064620.2.1 (Solyc07g064620)


Aliases : Solyc07g064620

Description : assembly factor (eIF1) of eIF1


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g064620.2.1

Target Alias Description ECC score Gene Family Method Actions
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.04 OrthoFinder output from all 47 species
Adi_g084963 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28765 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42471 No alias assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Als_g43105 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42079.t1 Aspi01Gene42079 assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g39450 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48547 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g50244 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G026700.1 Ceric.06G026700 assembly factor (eIF1) of eIF1 & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G021900.1 Ceric.13G021900 assembly factor (eIF1) of eIF1 & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.26G055600.1 Ceric.26G055600 assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g09924 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09385 No alias assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
LOC_Os01g58220.1 LOC_Os01g58220 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
LOC_Os05g41900.1 LOC_Os05g41900 assembly factor (eIF1) of eIF1 0.02 OrthoFinder output from all 47 species
Len_g17389 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48299 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10279 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22457 No alias assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00933 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Smo437304 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.04 OrthoFinder output from all 47 species
Spa_g22456 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33591 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 27 101
No external refs found!