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  5. Solyc07g063570.4.1

Solyc07g063570.4.1 (CcdA, Solyc07g063570)


Aliases : CcdA, Solyc07g063570

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g063570.4.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174500 CcdA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Aev_g07709 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Aob_g06460 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Cba_g16816 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.02G048700.1 CcdA, Ceric.02G048700 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g07775 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Gb_35619 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
LOC_Os11g04500.1 CcdA, LOC_Os11g04500 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
LOC_Os12g04270.1 CcdA, LOC_Os12g04270 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Nbi_g07517 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Pir_g06323 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008168 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g28294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16978 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Tin_g31999 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 165 372
No external refs found!