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  5. Solyc07g062700.3.1

Solyc07g062700.3.1 (Solyc07g062700)


Aliases : Solyc07g062700

Description : cation exchanger (NCL/EF-CAX)


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062700.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G53210 No alias sodium/calcium exchanger family protein /... 0.03 OrthoFinder output from all 47 species
AT2G34020 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
Aop_g59636 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07423.t1 Aspi01Gene07423 cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g49126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30904 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014240001 No alias Solute transport.carrier-mediated transport.CDF... 0.08 OrthoFinder output from all 47 species
LOC_Os02g14980.1 LOC_Os02g14980 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Len_g16412 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34847 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17606 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44003 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12151 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g039960.4.1 Solyc04g039960 Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Spa_g14686 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51259 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014320_P001 Zm00001e014320 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Zm00001e026032_P005 Zm00001e026032 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 309 373
IPR004837 NaCa_Exmemb 91 267
IPR004837 NaCa_Exmemb 438 580
No external refs found!