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  5. Solyc07g062310.4.1

Solyc07g062310.4.1 (Solyc07g062310)


Aliases : Solyc07g062310

Description : Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana (sp|f4kge8|gil1_arath : 129.0)


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062310.4.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00203020 GIL1,... Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00029p00203270 GIL1,... No description available 0.06 OrthoFinder output from all 47 species
AT1G53380 No alias Plant protein of unknown function (DUF641) 0.03 OrthoFinder output from all 47 species
AT2G32130 No alias Plant protein of unknown function (DUF641) 0.02 OrthoFinder output from all 47 species
AT5G58960 GIL1 Plant protein of unknown function (DUF641) 0.02 OrthoFinder output from all 47 species
Aspi01Gene14072.t1 Aspi01Gene14072 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56063.t2 Aspi01Gene56063 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g43171 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26038 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Ehy_g05772 GIL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024581001 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01024812001 GIL1 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g61040.1 GIL1, LOC_Os03g61040 regulator (GIL1) of phytochrome-mediated agravitropism 0.06 OrthoFinder output from all 47 species
Lfl_g29614 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Msp_g09402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21636 GIL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g33208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29344 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.03 OrthoFinder output from all 47 species
Smo184343 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g083110.1.1 GIL1, Solyc02g083110 regulator (GIL1) of phytochrome-mediated agravitropism 0.05 OrthoFinder output from all 47 species
Zm00001e006224_P001 GIL1, Zm00001e006224 regulator (GIL1) of phytochrome-mediated agravitropism 0.04 OrthoFinder output from all 47 species
Zm00001e019431_P001 Zm00001e019431 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e031256_P001 Zm00001e031256 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 73 198
No external refs found!