1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g062160.3.1

Solyc07g062160.3.1 (LZF1, STH3, DBB3,...)


Aliases : LZF1, STH3, DBB3, Solyc07g062160

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062160.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G38960 No alias B-box type zinc finger family protein 0.01 OrthoFinder output from all 47 species
Adi_g017902 No alias BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g081474 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03048 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49135 No alias BBX class-IV transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.33G017400.1 STO, Ceric.33G017400 BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g17444 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04332 No alias BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g04007 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09402 No alias BBX class-IV transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g39486 STO BBX class-IV transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo438224 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e010221_P001 Zm00001e010221 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e034791_P001 Zm00001e034791 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 53 89
No external refs found!