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  5. Solyc07g062130.3.1

Solyc07g062130.3.1 (RHM1, ROL1, ATRHM1,...)


Aliases : RHM1, ROL1, ATRHM1, Solyc07g062130

Description : UDP-L-rhamnose synthase


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g062130.3.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene44993.t1 RHM1, ROL1,... UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G016100.1 NRS/ER, UER1,... dTDP-rhamnose synthase *(NRS-ER) & original description:... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45540.1 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
MA_10105635g0010 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
MA_217856g0010 NRS/ER, UER1 UDP-L-rhamnose synthase 0.05 OrthoFinder output from all 47 species
Msp_g09587 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09975 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13458 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24187 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 389 561
IPR016040 NAD(P)-bd_dom 10 315
No external refs found!