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  5. Solyc07g061780.4.1

Solyc07g061780.4.1 (UBP15, Solyc07g061780)


Aliases : UBP15, Solyc07g061780

Description : deubiquitinase (UBP15-21)


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g061780.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013897 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080212 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18505 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15601 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14667 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08851 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09670 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08414 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07912 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17492 UBP15 Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g14730.1 UBP15, LOC_Os02g14730 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
LOC_Os06g44380.1 UBP19, LOC_Os06g44380 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.06 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g03763 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27850 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20105 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05297 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08304 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09289 No alias deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015501_P001 UBP21, Zm00001e015501 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e022516_P001 UBP17, Zm00001e022516 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
Zm00001e036315_P001 UBP23, Zm00001e036315 deubiquitinase (UBP23) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 441 746
IPR002893 Znf_MYND 78 115
No external refs found!