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  5. Solyc07g056550.3.1

Solyc07g056550.3.1 (Solyc07g056550)


Aliases : Solyc07g056550

Description : SSU processome assembly factor (ENP1)


Gene families : OG0005927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g056550.3.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00173000 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Aop_g02538 No alias SSU processome assembly factor *(ENP1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G044500.1 Ceric.26G044500 SSU processome assembly factor *(ENP1) & original... 0.07 OrthoFinder output from all 47 species
Cre01.g063267 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
GSVIVT01011050001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os09g18320.1 LOC_Os09g18320 SSU processome assembly factor (ENP1) 0.06 OrthoFinder output from all 47 species
Lfl_g01444 No alias SSU processome assembly factor *(ENP1) & original... 0.02 OrthoFinder output from all 47 species
MA_136916g0010 No alias SSU processome assembly factor (ENP1) 0.03 OrthoFinder output from all 47 species
MA_170011g0010 No alias SSU processome assembly factor (ENP1) 0.03 OrthoFinder output from all 47 species
Mp5g10140.1 No alias SSU processome assembly factor (ENP1) 0.07 OrthoFinder output from all 47 species
Sam_g49538 No alias SSU processome assembly factor *(ENP1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e006514_P004 Zm00001e006514 SSU processome assembly factor (ENP1) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007955 Bystin 141 397
No external refs found!