Solyc07g055610.3.1 (Solyc07g055610)

Aliases : Solyc07g055610

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g055610.3.1
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00250360	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00044p00118900	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.03	OrthoFinder output from all 47 species
AMTR_s00109p00126980	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AT1G31540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G56520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G63870	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G63880	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G69550	No alias	disease resistance protein (TIR-NBS-LRR class)	0.04	OrthoFinder output from all 47 species
AT1G72900	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.05	OrthoFinder output from all 47 species
AT1G72910	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.04	OrthoFinder output from all 47 species
AT2G14080	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT3G44400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT3G44480	cog1, RPP1	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44670	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT4G08450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G09360	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT4G16857	No alias	No description available	0.03	OrthoFinder output from all 47 species
AT4G16860	RPP4	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT4G16890	SNC1, BAL	disease resistance protein (TIR-NBS-LRR class), putative	0.05	OrthoFinder output from all 47 species
AT4G16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G16950	RPP5	Disease resistance protein (TIR-NBS-LRR class) family	0.08	OrthoFinder output from all 47 species
AT4G16960	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G11250	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.05	OrthoFinder output from all 47 species
AT5G18360	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G36930	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G40060	No alias	Disease resistance protein (NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G40090	No alias	Disease resistance protein (TIR-NBS class)	0.04	OrthoFinder output from all 47 species
AT5G40100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G46270	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G46450	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G46490	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G46520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G48780	No alias	disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from all 47 species
AT5G51630	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
Adi_g060996	No alias	plastidial ribosome biogenesis factor *(PAC) & original...	0.02	OrthoFinder output from all 47 species
Adi_g065524	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene45494.t1	Aspi01Gene45494	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.08G007100.1	Ceric.08G007100	not classified & original description: pacid=50638446...	0.03	OrthoFinder output from all 47 species
Ceric.08G032000.1	Ceric.08G032000	not classified & original description: pacid=50637512...	0.03	OrthoFinder output from all 47 species
Ceric.15G017300.1	Ceric.15G017300	not classified & original description: pacid=50640848...	0.06	OrthoFinder output from all 47 species
GSVIVT01004877001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
GSVIVT01025907001	TAO1	External stimuli response.biotic stress.pathogen...	0.04	OrthoFinder output from all 47 species
GSVIVT01025968001	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01029009001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_04749	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.02	OrthoFinder output from all 47 species
Gb_09783	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_23545	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_26523	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_32215	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_36932	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_101024g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_497369g0010	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
MA_705541g0010	CSA1	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
MA_86318g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g34289	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g42611	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g44077	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46217	No alias	effector receptor *(NLR) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g52057	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08651	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g008800.3.1	Solyc01g008800	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Solyc11g011080.3.1	Solyc11g011080	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Zm00001e035278_P001	Zm00001e035278	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	5	90

External Links

No external refs found!

Solyc07g055610.3.1 (Solyc07g055610)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation