Solyc07g052780.3.1 (Solyc07g052780)

Aliases : Solyc07g052780

Description : effector receptor (NLR)

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g052780.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00217790	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00109p00126980	evm_27.TU.AmTr_v1...	Disease resistance protein TAO1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G17610	No alias	Disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from all 47 species
AT1G17615	No alias	Disease resistance protein (TIR-NBS class)	0.06	OrthoFinder output from all 47 species
AT1G56520	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT1G56540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G63750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G63860	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT1G63880	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G72840	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.05	OrthoFinder output from all 47 species
AT1G72850	No alias	Disease resistance protein (TIR-NBS class)	0.03	OrthoFinder output from all 47 species
AT1G72940	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.05	OrthoFinder output from all 47 species
AT2G14080	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT3G04210	No alias	Disease resistance protein (TIR-NBS class)	0.04	OrthoFinder output from all 47 species
AT3G04220	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT4G16890	SNC1, BAL	disease resistance protein (TIR-NBS-LRR class), putative	0.05	OrthoFinder output from all 47 species
AT5G22690	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G38350	No alias	Disease resistance protein (NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT5G41540	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT5G46260	No alias	disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G46500	No alias	BEST Arabidopsis thaliana protein match is: disease...	0.03	OrthoFinder output from all 47 species
AT5G49140	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	OrthoFinder output from all 47 species
AT5G58120	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Aev_g14789	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g17168	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18880	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26290	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g31828	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g12103	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g27334	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g61290	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene48806.t1	Aspi01Gene48806	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g12869	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g40335	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g51801	LAZ5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26963	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g32328	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01012762001	No alias	External stimuli response.biotic stress.pathogen...	0.04	OrthoFinder output from all 47 species
GSVIVT01020980001	No alias	External stimuli response.biotic stress.pathogen...	0.05	OrthoFinder output from all 47 species
GSVIVT01029009001	No alias	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Gb_03492	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Gb_04246	No alias	effector receptor (NLR)	0.08	OrthoFinder output from all 47 species
Gb_09783	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Gb_11356	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Gb_12318	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_17905	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.04	OrthoFinder output from all 47 species
Gb_18407	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
Gb_20302	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
Gb_23544	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Gb_25097	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.04	OrthoFinder output from all 47 species
Gb_29200	MEKK4, ATWRKY19,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_36252	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_10097127g0010	No alias	effector receptor (NLR)	0.08	OrthoFinder output from all 47 species
MA_10430440g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_10431791g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
MA_10432427g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_10433003g0040	No alias	effector receptor (NLR)	0.07	OrthoFinder output from all 47 species
MA_10434210g0010	No alias	Disease resistance protein TAO1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10434300g0010	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.04	OrthoFinder output from all 47 species
MA_12346g0030	No alias	effector receptor (NLR)	0.09	OrthoFinder output from all 47 species
MA_146875g0010	No alias	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species
MA_263716g0010	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.04	OrthoFinder output from all 47 species
MA_395749g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_410141g0010	No alias	effector receptor (NLR)	0.04	OrthoFinder output from all 47 species
MA_4576769g0010	No alias	effector receptor (NLR)	0.05	OrthoFinder output from all 47 species
MA_750097g0010	No alias	effector receptor (NLR)	0.06	OrthoFinder output from all 47 species
MA_7692406g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_8963386g0010	No alias	TMV resistance protein N OS=Nicotiana glutinosa...	0.03	OrthoFinder output from all 47 species
Pir_g25030	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g34544	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g36302	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g37315	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37963	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g43673	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g46217	No alias	effector receptor *(NLR) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g49159	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g52052	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g032650.3.1	Solyc02g032650	effector receptor (NLR)	0.09	OrthoFinder output from all 47 species
Solyc04g007320.3.1	Solyc04g007320	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Solyc07g052800.3.1	Solyc07g052800	TMV resistance protein N OS=Nicotiana glutinosa...	0.09	OrthoFinder output from all 47 species
Solyc12g097020.2.1	Solyc12g097020	effector receptor (NLR)	0.07	OrthoFinder output from all 47 species
Spa_g37169	LAZ5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g49746	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54642	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	11	147

External Links

No external refs found!

Solyc07g052780.3.1 (Solyc07g052780)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation