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  5. Solyc07g052100.4.1

Solyc07g052100.4.1 (Solyc07g052100)


Aliases : Solyc07g052100

Description : chromatin remodeling factor (Rad5-like)


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g052100.4.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012697001 No alias Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Solyc07g052020.2.1 Solyc07g052020 chromatin remodeling factor (Rad5-like) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 655 768
IPR000330 SNF2_N 92 405
IPR018957 Znf_C3HC4_RING-type 570 609
No external refs found!