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  5. Solyc07g048110.4.1

Solyc07g048110.4.1 (Solyc07g048110)


Aliases : Solyc07g048110

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g048110.4.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT1G32090 No alias early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
AT4G15430 No alias ERD (early-responsive to dehydration stress) family protein 0.05 OrthoFinder output from all 47 species
Ala_g39285 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00231.t1 ERD4, Aspi01Gene00231 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20320.t1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0104.g044705 No alias calcium-permeable channel *(OSCA) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0199.g057474 ERD4 not classified & original description: CDS=1-558 0.07 OrthoFinder output from all 47 species
Cba_g26928 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g58034 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.27 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre13.g574850 No alias CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ehy_g28230 ERD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08555 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_08556 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Gb_24188 No alias calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_10435227g0010 No alias calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
MA_10551g0010 No alias Protein OSCA1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g08382 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20112 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17063 No alias calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000924 ERD4 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Spa_g06692 No alias calcium-permeable channel *(OSCA) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15123 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005168_P001 RXW8, Zm00001e005168 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Zm00001e031717_P002 Zm00001e031717 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 226 388
IPR032880 Csc1/OSCA1-like_N 36 205
IPR003864 CSC1/OSCA1-like_7TM 399 671
No external refs found!