Solyc07g047800.3.1 (Solyc07g047800)


Aliases : Solyc07g047800

Description : no hits & (original description: none)


Gene families : OG0001408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g047800.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G17845 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G01980 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G55290 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G55310 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g08126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00473 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025755001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033062001 No alias Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_27390 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g22040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_30006g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002962 No alias not classified & original description: CDS=1-843 0.03 OrthoFinder output from all 47 species
Sam_g12352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g078360.3.1 Solyc10g078360 3-oxoacyl-[acyl-carrier-protein] reductase,... 0.04 OrthoFinder output from all 47 species
Solyc10g080890.2.1 Solyc10g080890 3-oxoacyl-[acyl-carrier-protein] reductase,... 0.03 OrthoFinder output from all 47 species
Solyc12g045030.2.1 Solyc12g045030 Short-chain type dehydrogenase/reductase OS=Picea abies... 0.04 OrthoFinder output from all 47 species
Solyc12g100220.2.1 Solyc12g100220 Short-chain type dehydrogenase/reductase OS=Picea abies... 0.05 OrthoFinder output from all 47 species
Solyc12g100280.3.1 Solyc12g100280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070085 glycosylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!