Solyc07g043310.3.1 (GABA-T, HER1, POP2,...)

Aliases : GABA-T, HER1, POP2, Solyc07g043310

Description : GABA pyruvate transaminase

Gene families : OG0004682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g043310.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G22200	GABA-T, HER1, POP2	Pyridoxal phosphate (PLP)-dependent transferases...	0.07	OrthoFinder output from all 47 species
Dac_g13594	GABA-T, HER1, POP2	EC_2.6 transferase transferring nitrogenous group &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015824001	GABA-T, HER1, POP2	Amino acid metabolism.degradation.gamma-aminobutyrate...	0.03	OrthoFinder output from all 47 species
LOC_Os04g52450.1	GABA-T, HER1,...	GABA pyruvate transaminase	0.03	OrthoFinder output from all 47 species
Ppi_g40903	GABA-T, HER1, POP2	EC_2.6 transferase transferring nitrogenous group &...	0.04	OrthoFinder output from all 47 species
Zm00001e006948_P001	GABA-T, HER1,...	GABA pyruvate transaminase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008483	transaminase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016769	transferase activity, transferring nitrogenous groups	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0018580	nitronate monooxygenase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005814	Aminotrans_3	84	500

External Links

No external refs found!