1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g043230.3.1

Solyc07g043230.3.1 (ZIP3, Solyc07g043230)


Aliases : ZIP3, Solyc07g043230

Description : metal cation transporter (ZIP)


Gene families : OG0000472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g043230.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00184330 ZIP7,... Solute transport.carrier-mediated transport.ZIP... 0.06 OrthoFinder output from all 47 species
AMTR_s00062p00183460 ZIP1,... Solute transport.carrier-mediated transport.ZIP... 0.04 OrthoFinder output from all 47 species
AT1G05300 ZIP5 zinc transporter 5 precursor 0.04 OrthoFinder output from all 47 species
AT1G60960 IRT3, ATIRT3 iron regulated transporter 3 0.04 OrthoFinder output from all 47 species
AT2G32270 ZIP3 zinc transporter 3 precursor 0.05 OrthoFinder output from all 47 species
Ala_g29259 ZIP1 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19920 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27419.t1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0014.g013568 ZIP1 metal cation transporter *(ZIP) & original description: CDS=1-972 0.05 OrthoFinder output from all 47 species
Ceric.13G038400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.14G032100.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.14G032400.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G032500.1 ATZIP4, ZIP4,... metal cation transporter *(ZIP) & original description:... 0.01 OrthoFinder output from all 47 species
Dac_g35439 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31389 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03468 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16998 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026252001 ZIP10 Solute transport.carrier-mediated transport.ZIP... 0.01 OrthoFinder output from all 47 species
Gb_00356 ATZIP6, ZIP6 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Gb_39061 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46454.1 ZIP10, LOC_Os03g46454 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46470.1 ZIP10, LOC_Os03g46470 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52310.1 ZIP1, LOC_Os04g52310 metal cation transporter (ZIP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07210.1 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12890.1 ZIP1, LOC_Os07g12890 metal cation transporter (ZIP) 0.11 OrthoFinder output from all 47 species
Len_g45330 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17667 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_31095g0010 ATZIP4, ZIP4 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species
Ppi_g10549 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006456 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g17001 No alias metal cation transporter *(ZIP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo91749 ZIP1 Solute transport.carrier-mediated transport.ZIP... 0.02 OrthoFinder output from all 47 species
Solyc02g069190.4.1 ZIP10, Solyc02g069190 metal cation transporter (ZIP) 0.06 OrthoFinder output from all 47 species
Solyc02g069200.3.1 ATIRT1, IRT1,... metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Solyc07g043200.2.1 ZIP3, Solyc07g043200 metal cation transporter (ZIP) 0.04 OrthoFinder output from all 47 species
Spa_g03784 IRT3, ATIRT3 metal cation transporter *(ZIP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18046 ATZIP4, ZIP4 metal cation transporter *(ZIP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027487_P001 ATZIP6, ZIP6,... metal cation transporter (ZIP) 0.05 OrthoFinder output from all 47 species
Zm00001e033157_P001 ZIP5, Zm00001e033157 metal cation transporter (ZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003689 ZIP 43 339
No external refs found!