1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g041180.4.1

Solyc07g041180.4.1 (Solyc07g041180)


Aliases : Solyc07g041180

Description : actin stability co-factor (PMIR)


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g041180.4.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g31869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00292.t1 Aspi01Gene00292 actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03524.t1 Aspi01Gene03524 actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014097 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04049 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09253 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30037 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015144001 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.02 OrthoFinder output from all 47 species
Gb_29391 No alias actin stability co-factor (PMIR) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39430.1 PMI1, LOC_Os10g39430 actin stability factor (PMI1/PMI15) 0.03 OrthoFinder output from all 47 species
Lfl_g28002 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10024 No alias actin stability co-factor *(PMIR) & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g02977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11028 No alias acTin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 78 223
IPR018392 LysM_dom 1084 1129
No external refs found!