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  5. Solyc07g039570.3.1

Solyc07g039570.3.1 (Solyc07g039570)


Aliases : Solyc07g039570

Description : transcription factor (bHLH)


Gene families : OG0011158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011158_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g039570.3.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT5G56960 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.06 OrthoFinder output from all 47 species
GSVIVT01015189001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_15442 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os01g09990.1 LOC_Os01g09990 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g39330.1 LOC_Os01g39330 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os05g11070.1 LOC_Os05g11070 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_317126g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016554_P001 Zm00001e016554 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e020505_P001 Zm00001e020505 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e025985_P001 Zm00001e025985 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e027779_P001 Zm00001e027779 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 333 379
No external refs found!