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  5. Solyc07g032110.3.1

Solyc07g032110.3.1 (Solyc07g032110)


Aliases : Solyc07g032110

Description : VPS23-interacting protein (SH3P2)


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc07g032110.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014073 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025955 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05416 No alias SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 308 356
IPR004148 BAR_dom 51 257
No external refs found!