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  5. Solyc07g022920.3.1

Solyc07g022920.3.1 (Solyc07g022920)


Aliases : Solyc07g022920

Description : transcription factor (BSD)


Gene families : OG0002344 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002344_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc07g022920.3.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00124890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.BSD... 0.03 OrthoFinder output from all 47 species
Ala_g06412 No alias transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G022600.1 Ceric.04G022600 transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.36G022400.1 Ceric.36G022400 transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g03916 No alias transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32233 No alias transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06868 No alias transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021291 No alias transcription factor & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0977.g027892 No alias transcription factor & original description: CDS=127-1830 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR005607 BSD_dom 175 230
No external refs found!