Solyc07g022840.1.1 (Solyc07g022840)


Aliases : Solyc07g022840

Description : GTPase effector (BDR)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g022840.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00165p00000750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G75160 No alias Protein of unknown function (DUF620) 0.05 OrthoFinder output from all 47 species
AT5G66740 No alias Protein of unknown function (DUF620) 0.07 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18965 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05740 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50254.t1 Aspi01Gene50254 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031036 No alias GTPase effector *(BDR) & original description: CDS=812-1645 0.03 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G036700.1 Ceric.33G036700 GTPase effector *(BDR) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009692001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g55795.1 LOC_Os01g55795 GTPase effector (BDR) 0.07 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Len_g17331 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14366 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29419 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432500g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18707 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03053 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11922 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12477 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052860.3.1 Solyc05g052860 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
Zm00001e028997_P004 Zm00001e028997 GTPase effector (BDR) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 120 357
No external refs found!