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  5. Solyc07g019650.4.1

Solyc07g019650.4.1 (PRORP1, Solyc07g019650)


Aliases : PRORP1, Solyc07g019650

Description : protein-only ribonuclease (RNase P)


Gene families : OG0002292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g019650.4.1
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00150030 PRORP1,... RNA processing.ribonuclease activities.RNase P... 0.03 OrthoFinder output from all 47 species
AT2G32230 PRORP1 proteinaceous RNase P 1 0.22 OrthoFinder output from all 47 species
AT4G21900 PRORP3 proteinaceous RNase P 3 0.02 OrthoFinder output from all 47 species
Als_g18782 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044548 PRORP1 protein-only ribonuclease *(RNase P) & original... 0.1 OrthoFinder output from all 47 species
Ceric.37G064300.1 PRORP3, Ceric.37G064300 protein-only ribonuclease *(RNase P) & original... 0.08 OrthoFinder output from all 47 species
Cre13.g563850 PRORP3 RNA processing.ribonuclease activities.RNase P... 0.01 OrthoFinder output from all 47 species
Dcu_g23240 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30543 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015365001 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.16 OrthoFinder output from all 47 species
GSVIVT01029730001 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species
Gb_29287 PRORP1 protein-only ribonuclease (RNase P) 0.03 OrthoFinder output from all 47 species
LOC_Os02g17360.1 PRORP1, LOC_Os02g17360 protein-only ribonuclease (RNase P) 0.11 OrthoFinder output from all 47 species
Len_g09208 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10050138g0010 PRORP1 protein-only ribonuclease (RNase P) 0.03 OrthoFinder output from all 47 species
MA_10429392g0010 PRORP1 protein-only ribonuclease (RNase P) 0.04 OrthoFinder output from all 47 species
Mp4g06160.1 PRORP1 protein-only ribonuclease (RNase P) 0.04 OrthoFinder output from all 47 species
Nbi_g13984 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26462 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Smo80247 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 120 177
IPR033443 PPR_long 243 390
IPR031595 PRORP_C 433 657
No external refs found!