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  5. Solyc07g019625.1.1

Solyc07g019625.1.1 (CRK8, Solyc07g019625)


Aliases : CRK8, Solyc07g019625

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 148.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g019625.1.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene31237.t1 CRK8, Aspi01Gene31237 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g065625.1.1 CRK8, Solyc01g065625 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc04g054529.1.1 CRK8, Solyc04g054529 Retrovirus-related Pol polyprotein from transposon RE2... 0.07 OrthoFinder output from all 47 species
Solyc04g055225.1.1 CRK8, Solyc04g055225 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species
Solyc05g050825.1.1 CRK8, Solyc05g050825 Uncharacterized mitochondrial protein AtMg00810... 0.02 OrthoFinder output from all 47 species
Solyc10g050517.1.1 Solyc10g050517 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g076565.1.1 CRK8, Solyc10g076565 Retrovirus-related Pol polyprotein from transposon RE2... 0.05 OrthoFinder output from all 47 species
Solyc11g056595.1.1 CRK8, Solyc11g056595 Uncharacterized mitochondrial protein AtMg00810... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!