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  5. Solyc07g019493.1.1

Solyc07g019493.1.1 (CRK8, Solyc07g019493)


Aliases : CRK8, Solyc07g019493

Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 148.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g019493.1.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Solyc01g065625.1.1 CRK8, Solyc01g065625 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc02g030461.1.1 CRK8, Solyc02g030461 Retrovirus-related Pol polyprotein from transposon RE2... 0.01 OrthoFinder output from all 47 species
Solyc03g044024.1.1 CRK8, Solyc03g044024 Retrovirus-related Pol polyprotein from transposon RE1... 0.01 OrthoFinder output from all 47 species
Solyc03g062835.1.1 CRK8, Solyc03g062835 Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Solyc04g007855.1.1 CRK8, Solyc04g007855 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc04g055225.1.1 CRK8, Solyc04g055225 Uncharacterized mitochondrial protein AtMg00810... 0.01 OrthoFinder output from all 47 species
Solyc04g150146.1.1 CRK8, Solyc04g150146 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Solyc06g009015.1.1 CRK8, Solyc06g009015 Retrovirus-related Pol polyprotein from transposon RE2... 0.08 OrthoFinder output from all 47 species
Solyc06g035495.1.1 CRK8, Solyc06g035495 Retrovirus-related Pol polyprotein from transposon RE1... 0.03 OrthoFinder output from all 47 species
Solyc06g048713.1.1 CRK8, Solyc06g048713 Retrovirus-related Pol polyprotein from transposon RE2... 0.1 OrthoFinder output from all 47 species
Solyc08g014612.1.1 CRK8, Solyc08g014612 Retrovirus-related Pol polyprotein from transposon RE1... 0.02 OrthoFinder output from all 47 species
Solyc09g042725.1.1 CRK8, Solyc09g042725 Retrovirus-related Pol polyprotein from transposon RE1... 0.09 OrthoFinder output from all 47 species
Solyc10g038045.1.1 CRK8, Solyc10g038045 Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Solyc12g040642.1.1 CRK8, Solyc12g040642 Retrovirus-related Pol polyprotein from transposon RE2... 0.05 OrthoFinder output from all 47 species
Solyc12g042855.1.1 CRK8, Solyc12g042855 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Solyc12g062203.1.1 CRK8, Solyc12g062203 Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!