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  5. Solyc07g009350.4.1

Solyc07g009350.4.1 (NOF1, Solyc07g009350)


Aliases : NOF1, Solyc07g009350

Description : no hits & (original description: none)


Gene families : OG0005501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g009350.4.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT1G17690 NOF1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.13 OrthoFinder output from all 47 species
Aob_g32853 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.38 No alias No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.39 No alias RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.02 OrthoFinder output from all 47 species
Cre04.g218300 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.14 OrthoFinder output from all 47 species
Dcu_g07063 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
LOC_Os05g22920.1 NOF1, LOC_Os05g22920 rDNA transcriptional regulator (NOF1) 0.02 OrthoFinder output from all 47 species
MA_10437067g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g15392 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Ppi_g01193 NOF1 regulatory protein *(NOF1) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Sam_g12400 No alias regulatory protein *(NOF1) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Smo446868 NOF1 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.03 OrthoFinder output from all 47 species
Zm00001e039338_P003 NOF1, Zm00001e039338 rDNA transcriptional regulator (NOF1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR010678 UTP25 264 355
No external refs found!