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  5. Solyc07g009140.3.1

Solyc07g009140.3.1 (Solyc07g009140)


Aliases : Solyc07g009140

Description : regulatory component RPN7 of 26S proteasome


Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc07g009140.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G24820 No alias 26S proteasome, regulatory subunit Rpn7;Proteasome... 0.11 OrthoFinder output from all 47 species
Adi_g014551 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Als_g13037 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cba_g10280 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.75 No alias Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Cre13.g581450 No alias Protein degradation.26S proteasome.regulatory... 0.12 OrthoFinder output from all 47 species
Dcu_g08722 No alias regulatory component *(RPN7) of 26S proteasome &... 0.08 OrthoFinder output from all 47 species
Gb_07144 No alias regulatory component RPN7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os04g40850.1 LOC_Os04g40850 regulatory component RPN7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g07648 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp1g10100.1 No alias regulatory component RPN7 of 26S proteasome 0.11 OrthoFinder output from all 47 species
Smo146093 No alias Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Zm00001e007775_P001 Zm00001e007775 regulatory component RPN7 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Zm00001e015028_P002 Zm00001e015028 regulatory component RPN7 of 26S proteasome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR019585 Rpn7/CSN1 66 236
IPR000717 PCI_dom 254 354
No external refs found!