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  5. Solyc07g008000.4.1

Solyc07g008000.4.1 (Solyc07g008000)


Aliases : Solyc07g008000

Description : RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0002854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g008000.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G52580 No alias RabGAP/TBC domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g113500 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Ala_g05046 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Ala_g11428 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Aop_g10744 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species
Cba_g01159 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G064400.1 Ceric.02G064400 Rab GTPase-activating protein *(RabGAP21) & original... 0.04 OrthoFinder output from all 47 species
Ceric.37G052400.1 Ceric.37G052400 Rab GTPase-activating protein *(RabGAP21) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01015579001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Gb_09990 No alias RAB-GTPase-activating protein (RAB-GAP) 0.06 OrthoFinder output from all 47 species
Len_g15022 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g01943 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.03 OrthoFinder output from all 47 species
Mp6g20270.1 No alias RAB-GTPase-activating protein (RAB-GAP) 0.03 OrthoFinder output from all 47 species
Nbi_g04857 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.04 OrthoFinder output from all 47 species
Sam_g49033 No alias Rab GTPase-activating protein *(RabGAP21) & original... 0.02 OrthoFinder output from all 47 species
Smo96534 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021935 SGSM1/2_RBD 45 186
IPR000195 Rab-GTPase-TBC_dom 382 609
No external refs found!