Solyc07g007735.1.1 (LCR69, PDF2.2, Solyc07g007735)

Aliases : LCR69, PDF2.2, Solyc07g007735

Description : defensin (PDF2)

Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g007735.1.1
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AT1G61070	PDF2.4, LCR66	low-molecular-weight cysteine-rich 66	0.03	OrthoFinder output from all 47 species
AT5G63660	LCR74, PDF2.5	Scorpion toxin-like knottin superfamily protein	0.03	OrthoFinder output from all 47 species
MA_5320g0010	PDF2.1, LCR70	defensin (PDF1). defensin (PDF2)	0.02	OrthoFinder output from all 47 species
Solyc04g008470.3.1	PDF2.3, LCR68,...	defensin (PDF2)	0.04	OrthoFinder output from all 47 species
Solyc07g007710.4.1	LCR69, PDF2.2,...	defensin (PDF2)	0.03	OrthoFinder output from all 47 species
Solyc11g006260.2.1	LCR74, PDF2.5,...	defensin (PDF2)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!