Solyc07g007640.3.1 (UBP22, Solyc07g007640)

Aliases : UBP22, Solyc07g007640

Description : component UBP22 of SAGA transcription co-activator complex. ubiquitin-specific protease

Gene families : OG0004738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004738_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g007640.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00066910	UBP22,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
Ceric.16G000600.1	UBP22, Ceric.16G000600	ubiquitin-specific protease & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g35894	UBP22	ubiquitin-specific protease & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01903	UBP22	ubiquitin-specific protease & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	31	222

External Links

No external refs found!