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  5. Solyc07g006855.2.1

Solyc07g006855.2.1 (Solyc07g006855)


Aliases : Solyc07g006855

Description : CASP-like protein 2C1 OS=Populus trichocarpa (sp|b9im09|csplg_poptr : 129.0)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006855.2.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.04 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18231.t1 Aspi01Gene18231 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33412.t1 Aspi01Gene33412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.03 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.04 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.06 OrthoFinder output from all 47 species
Dac_g45230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29089 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_02196 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g21320.1 LOC_Os04g21320 CASP-like protein 2A1 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os12g32970.1 LOC_Os12g32970 CASP-like protein 2B1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Msp_g06626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.04 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006702 CASP_dom 5 152
No external refs found!