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  5. LOC_Os03g45710.1

LOC_Os03g45710.1


Description : Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana (sp|o23344|fdc1_arath : 129.0)


Gene families : OG_01_0007784 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007784_tree ,
OG_02_0009406 (LandPlants) Phylogenetic Tree(s): OG_02_0009406_tree ,
OG_03_0010572 (SeedPlants) Phylogenetic Tree(s): OG_03_0010572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g45710.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00044800 evm_27.TU.AmTr_v1... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.09 Archaeplastida
Cre07.g334800 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01017981001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_40918 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_184421g0010 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp5g15920.1 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c16_6230V3.1 No alias 2Fe-2S ferredoxin-like superfamily protein 0.05 Archaeplastida
Zm00001e005218_P001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.09 Archaeplastida
AMTR_s00004p00044800 evm_27.TU.AmTr_v1... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 LandPlants
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.09 LandPlants
GSVIVT01017981001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.05 LandPlants
Gb_40918 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 LandPlants
MA_184421g0010 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 LandPlants
Mp5g15920.1 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 LandPlants
Pp3c16_6230V3.1 No alias 2Fe-2S ferredoxin-like superfamily protein 0.05 LandPlants
Zm00001e005218_P001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.08 LandPlants
AMTR_s00004p00044800 evm_27.TU.AmTr_v1... Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 SeedPlants
AT4G14890 FdC2 2Fe-2S ferredoxin-like superfamily protein 0.09 SeedPlants
GSVIVT01017981001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana 0.04 SeedPlants
Gb_40918 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.05 SeedPlants
MA_184421g0010 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e005218_P001 No alias Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana... 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 53 123
No external refs found!