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  5. Solyc07g006640.3.1

Solyc07g006640.3.1 (ATARL1, ARF3, ARL1,...)


Aliases : ATARL1, ARF3, ARL1, Solyc07g006640

Description : ARF-GTPase


Gene families : OG0006121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g006640.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.05 OrthoFinder output from all 47 species
Aev_g07652 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16371 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02783 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.2 ATARL1, ARF3, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Cre12.g535900 ATARL1, ARF3, ARL1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
Dcu_g34242 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g01863 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g15040.1 ATARL1, ARF3,... ARF-GTPase 0.05 OrthoFinder output from all 47 species
Mp8g06130.1 ATARL1, ARF3, ARL1 ARF-GTPase 0.03 OrthoFinder output from all 47 species
Msp_g12723 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02990 ATARL1, ARF3, ARL1 ARF-GTPase *(ARFE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021566_P001 ATARL1, ARF3,... ARF-GTPase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 176
No external refs found!