Solyc07g006560.3.1 (Solyc07g006560)

Aliases : Solyc07g006560

Description : no hits & (original description: none)

Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g006560.3.1
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AT1G14210	No alias	Ribonuclease T2 family protein	0.03	OrthoFinder output from all 47 species
Als_g46642	No alias	T2-type RNase *(RNS) & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g15509	No alias	T2-type RNase *(RNS) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.22G011400.1	ATRNS1, RNS1,...	T2-type RNase *(RNS) & original description:...	0.01	OrthoFinder output from all 47 species
Cre03.g160953	PGP1, ABCB1, ATPGP1	No description available	0.02	OrthoFinder output from all 47 species
Gb_30836	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g04568	ATRNS1, RNS1	T2-type RNase *(RNS) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g005640.3.1	Solyc04g005640	Intracellular ribonuclease LX OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
MF	GO:0033897	ribonuclease T2 activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	2	124

External Links

No external refs found!