LOC_Os03g45410.1

Description : protein (TBP) component TATA-box-binding of TFIId basal transcription regulation complex. TATA-box-binding protein of RNA polymerase III-dependent transcription

Gene families : OG_01_0001939 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001939_tree ,
OG_02_0002908 (LandPlants) Phylogenetic Tree(s): OG_02_0002908_tree ,
OG_03_0002748 (SeedPlants) Phylogenetic Tree(s): OG_03_0002748_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g45410.1
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00131170	evm_27.TU.AmTr_v1...	RNA biosynthesis.RNA polymerase III-dependent...	0.02	Archaeplastida
AMTR_s00047p00130260	evm_27.TU.AmTr_v1...	RNA biosynthesis.RNA polymerase III-dependent...	0.02	LandPlants
AMTR_s00047p00130260	evm_27.TU.AmTr_v1...	RNA biosynthesis.RNA polymerase III-dependent...	0.02	SeedPlants
AMTR_s00047p00131170	evm_27.TU.AmTr_v1...	RNA biosynthesis.RNA polymerase III-dependent...	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription, initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000814	TBP	130	212
IPR000814	TBP	27	61
IPR000814	TBP	73	121

External Links

No external refs found!

LOC_Os03g45410.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation