Solyc07g005560.3.1 (EIF-5A, ELF5A-1,...)

Aliases : EIF-5A, ELF5A-1, EIF5A, ATELF5A-1, Solyc07g005560

Description : poly-P/G elongation factor (eEF5/eIF5A)

Gene families : OG0000704 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g005560.3.1

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021589.27	ELF5A-3, ATELF5A-3	Protein biosynthesis.translation elongation.eEF5(eIF5A)...	0.03	OrthoFinder output from all 47 species
Gb_08936	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.03	OrthoFinder output from all 47 species
Mp6g19610.1	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.03	OrthoFinder output from all 47 species
Pp3c12_3540V3.1	ELF5A-3,...	eukaryotic elongation factor 5A-3	0.01	OrthoFinder output from all 47 species
Solyc01g011000.3.1	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.04	OrthoFinder output from all 47 species
Solyc04g005510.3.1	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.05	OrthoFinder output from all 47 species
Zm00001e010696_P001	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.03	OrthoFinder output from all 47 species
Zm00001e035464_P002	EIF-5A, ELF5A-1,...	poly-P/G elongation factor (eEF5/eIF5A)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006448	regulation of translational elongation	None	Extended
BP	GO:0006449	regulation of translational termination	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
BP	GO:0034250	positive regulation of amide metabolic process	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	IEA	Interproscan
BP	GO:0043243	positive regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045727	positive regulation of translation	None	Extended
BP	GO:0045901	positive regulation of translational elongation	IEA	Interproscan
BP	GO:0045905	positive regulation of translational termination	IEA	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020189	Transl_elong_IF5A_C	85	154

External Links

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Solyc07g005560.3.1 (EIF-5A, ELF5A-1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation