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  5. Solyc07g005510.3.1

Solyc07g005510.3.1 (SFD4, FADC, FAD6,...)


Aliases : SFD4, FADC, FAD6, Solyc07g005510

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0002742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g005510.3.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00204450 SFD4, FADC,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 OrthoFinder output from all 47 species
AT4G30950 SFD4, FADC, FAD6 fatty acid desaturase 6 0.03 OrthoFinder output from all 47 species
Adi_g087305 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aop_g01297 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G044600.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.11 OrthoFinder output from all 47 species
Ceric.35G020000.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11301 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03658 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18470 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003874001 SFD4, FADC, FAD6 Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus 0.07 OrthoFinder output from all 47 species
Gb_08625 SFD4, FADC, FAD6 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
LOC_Os08g34220.1 SFD4, FADC,... omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Lfl_g07005 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.08 OrthoFinder output from all 47 species
Mp4g24020.1 SFD4, FADC, FAD6 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species
Msp_g07910 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ore_g38628 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11735 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Pp3c15_23330V3.1 SFD4, FADC,... fatty acid desaturase 6 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 143 389
No external refs found!