Solyc06g084450.4.1 (Solyc06g084450)

Aliases : Solyc06g084450

Description : ROP-activating protein (RopGAP)

Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g084450.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00129680	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.09	OrthoFinder output from all 47 species
AT1G08340	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.04	OrthoFinder output from all 47 species
AT4G03100	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.23	OrthoFinder output from all 47 species
Ala_g02417	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g15854	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08802	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g05032	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07783.t1	Aspi01Gene07783	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0055.g033926	No alias	ROP-activating protein *(RopGAP) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g05570	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10250	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g11578	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06070	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01033865001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
GSVIVT01036109001	No alias	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
LOC_Os02g45600.1	LOC_Os02g45600	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os07g22580.1	LOC_Os07g22580	ROP-activating protein (RopGAP)	0.16	OrthoFinder output from all 47 species
LOC_Os11g05540.1	LOC_Os11g05540	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os12g05900.1	LOC_Os12g05900	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os12g34840.1	LOC_Os12g34840	ROP-activating protein (RopGAP)	0.16	OrthoFinder output from all 47 species
Len_g59558	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g39497	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
MA_293369g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g13116	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30150	No alias	ROP-activating protein *(RopGAP) & original description: none	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002103	No alias	ROP-activating protein *(RopGAP) & original description:...	0.05	OrthoFinder output from all 47 species
Sam_g24684	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g074340.3.1	Solyc09g074340	ROP-activating protein (RopGAP)	0.05	OrthoFinder output from all 47 species
Spa_g04743	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g12214	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g45662	No alias	ROP-activating protein *(RopGAP) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44395	No alias	ROP-activaTing protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e018302_P003	Zm00001e018302	ROP-activating protein (RopGAP)	0.19	OrthoFinder output from all 47 species
Zm00001e033341_P001	Zm00001e033341	ROP-activating protein (RopGAP)	0.15	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000775	chromosome, centromeric region	IEP	HCCA
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
BP	GO:0007059	chromosome segregation	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0045132	meiotic chromosome segregation	IEP	HCCA
CC	GO:0098687	chromosomal region	IEP	HCCA
BP	GO:0098813	nuclear chromosome segregation	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000095	CRIB_dom	54	81
IPR000198	RhoGAP_dom	118	252

External Links

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Solyc06g084450.4.1 (Solyc06g084450)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation