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  5. Solyc06g084330.3.1

Solyc06g084330.3.1 (Solyc06g084330)


Aliases : Solyc06g084330

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084330.3.1
Cluster HCCA: Cluster_452

Target Alias Description ECC score Gene Family Method Actions
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 OrthoFinder output from all 47 species
Dac_g18153 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05384 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31407 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14451 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20112 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11165 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g15123 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 372 644
IPR027815 CSC1/OSCA1-like_cyt 199 361
IPR032880 Csc1/OSCA1-like_N 7 178
No external refs found!