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  5. Solyc06g084090.4.1

Solyc06g084090.4.1 (HTA11, Solyc06g084090)


Aliases : HTA11, Solyc06g084090

Description : histone (H2A)


Gene families : OG0001447 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084090.4.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT2G38810 HTA8 histone H2A 8 0.02 OrthoFinder output from all 47 species
AT3G54560 HTA11 histone H2A 11 0.14 OrthoFinder output from all 47 species
Adi_g015031 HTA9 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085839 HTA9 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112137 HTA9 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44636 HTA9 histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0002.g001167 HTA9 histone *(H2A) & original description: CDS=274-711 0.05 OrthoFinder output from all 47 species
Ceric.05G084600.1 HTA9, Ceric.05G084600 histone *(H2A) & original description: pacid=50577468... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021108.27 HTA9 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Cre13.g567700 HTA9 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Dde_g12759 HTA9 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003139001 HTA11 Chromatin organisation.histones.H2A-type histone 0.09 OrthoFinder output from all 47 species
Gb_04984 HTA9 histone (H2A) 0.06 OrthoFinder output from all 47 species
Gb_38059 HTA9 histone (H2A) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06670.1 HTA11, LOC_Os03g06670 histone (H2A) 0.11 OrthoFinder output from all 47 species
LOC_Os10g28230.1 HTA11, LOC_Os10g28230 histone (H2A) 0.12 OrthoFinder output from all 47 species
Len_g22206 HTA9 histone *(H2A) & original description: none 0.13 OrthoFinder output from all 47 species
MA_100300g0010 HTA9 histone (H2A) 0.04 OrthoFinder output from all 47 species
Pnu_g22230 HTA9 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16499 No alias histone *(H2A) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g40535 HTA9 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40658 HTA9 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005636_P001 HTA8, Zm00001e005636 histone (H2A) 0.04 OrthoFinder output from all 47 species
Zm00001e012057_P001 HTA8, Zm00001e012057 histone (H2A) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 76 172
IPR032454 Histone_H2A_C 173 202
No external refs found!