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  5. Solyc06g083760.3.1

Solyc06g083760.3.1 (SDG18, SUVR2, Solyc06g083760)


Aliases : SDG18, SUVR2, Solyc06g083760

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0002277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083760.3.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G04050 SDG13, SUVR1 homolog of SU(var)3-9 1 0.03 OrthoFinder output from all 47 species
Azfi_s0139.g051169 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ceric.28G044400.1 SUVR4, SDG31,... EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Len_g13299 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g38485 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_106792g0010 SUVR4, SDG31 class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species
Ore_g18271 SUVR4, SDG31 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018848 WIYLD_domain 6 59
IPR001214 SET_dom 702 824
IPR007728 Pre-SET_dom 535 682
No external refs found!